The Interactions between the Long Non-coding RNA NERDL and Its Target Gene Affect Wood Formation in Populus tomentosa.
Identifieur interne : 001168 ( Main/Exploration ); précédent : 001167; suivant : 001169The Interactions between the Long Non-coding RNA NERDL and Its Target Gene Affect Wood Formation in Populus tomentosa.
Auteurs : Wan Shi [République populaire de Chine] ; Mingyang Quan [République populaire de Chine] ; Qingzhang Du [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine]Source :
- Frontiers in plant science [ 1664-462X ] ; 2017.
Abstract
Long non-coding RNAs (lncRNAs) are important regulatory factors for plant growth and development, but little is known about the allelic interactions of lncRNAs with mRNA in perennial plants. Here, we analyzed the interaction of the NERD (Needed for RDR2-independent DNA methylation) Populus tomentosa gene PtoNERD with its putative regulator, the lncRNA NERDL (NERD-related lncRNA), which partially overlaps with the promoter region of this gene. Expression analysis in eight tissues showed a positive correlation between NERDL and PtoNERD (r = 0.62), suggesting that the interaction of NERDL with its putative target might be involved in wood formation. We conducted association mapping in a natural population of P. tomentosa (435 unrelated individuals) to evaluate genetic variation and the interaction of the lncRNA NERDL with PtoNERD. Using additive and dominant models, we identified 30 SNPs (P < 0.01) associated with five tree growth and wood property traits. Each SNP explained 3.90-8.57% of phenotypic variance, suggesting that NERDL and its putative target play a common role in wood formation. Epistasis analysis uncovered nine SNP-SNP association pairs between NERDL and PtoNERD, with an information gain of -7.55 to 2.16%, reflecting the strong interactions between NERDL and its putative target. This analysis provides a powerful method for deciphering the genetic interactions of lncRNAs with mRNA and dissecting the complex genetic network of quantitative traits in trees.
DOI: 10.3389/fpls.2017.01035
PubMed: 28674544
PubMed Central: PMC5475392
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">The Interactions between the Long Non-coding RNA NERDL and Its Target Gene Affect Wood Formation in <i>Populus tomentosa</i>.</title><author><name sortKey="Shi, Wan" sort="Shi, Wan" uniqKey="Shi W" first="Wan" last="Shi">Wan Shi</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:28674544</idno><idno type="pmid">28674544</idno><idno type="doi">10.3389/fpls.2017.01035</idno><idno type="pmc">PMC5475392</idno><idno type="wicri:Area/Main/Corpus">001259</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001259</idno><idno type="wicri:Area/Main/Curation">001259</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001259</idno><idno type="wicri:Area/Main/Exploration">001259</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">The Interactions between the Long Non-coding RNA NERDL and Its Target Gene Affect Wood Formation in <i>Populus tomentosa</i>.</title><author><name sortKey="Shi, Wan" sort="Shi, Wan" uniqKey="Shi W" first="Wan" last="Shi">Wan Shi</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing</wicri:regionArea><wicri:noRegion>Beijing Forestry UniversityBeijing</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Long non-coding RNAs (lncRNAs) are important regulatory factors for plant growth and development, but little is known about the allelic interactions of lncRNAs with mRNA in perennial plants. Here, we analyzed the interaction of the NERD (Needed for RDR2-independent DNA methylation) <i>Populus tomentosa</i> gene <i>PtoNERD</i> with its putative regulator, the lncRNA NERDL (NERD-related lncRNA), which partially overlaps with the promoter region of this gene. Expression analysis in eight tissues showed a positive correlation between NERDL and <i>PtoNERD</i> (<i>r</i> = 0.62), suggesting that the interaction of NERDL with its putative target might be involved in wood formation. We conducted association mapping in a natural population of <i>P. tomentosa</i> (435 unrelated individuals) to evaluate genetic variation and the interaction of the lncRNA NERDL with <i>PtoNERD</i>. Using additive and dominant models, we identified 30 SNPs (<i>P</i> < 0.01) associated with five tree growth and wood property traits. Each SNP explained 3.90-8.57% of phenotypic variance, suggesting that NERDL and its putative target play a common role in wood formation. Epistasis analysis uncovered nine SNP-SNP association pairs between <i>NERDL</i> and <i>PtoNERD</i>, with an information gain of -7.55 to 2.16%, reflecting the strong interactions between NERDL and its putative target. This analysis provides a powerful method for deciphering the genetic interactions of lncRNAs with mRNA and dissecting the complex genetic network of quantitative traits in trees.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">28674544</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>8</Volume><PubDate><Year>2017</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>The Interactions between the Long Non-coding RNA NERDL and Its Target Gene Affect Wood Formation in <i>Populus tomentosa</i>.</ArticleTitle><Pagination><MedlinePgn>1035</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fpls.2017.01035</ELocationID><Abstract><AbstractText>Long non-coding RNAs (lncRNAs) are important regulatory factors for plant growth and development, but little is known about the allelic interactions of lncRNAs with mRNA in perennial plants. Here, we analyzed the interaction of the NERD (Needed for RDR2-independent DNA methylation) <i>Populus tomentosa</i> gene <i>PtoNERD</i> with its putative regulator, the lncRNA NERDL (NERD-related lncRNA), which partially overlaps with the promoter region of this gene. Expression analysis in eight tissues showed a positive correlation between NERDL and <i>PtoNERD</i> (<i>r</i> = 0.62), suggesting that the interaction of NERDL with its putative target might be involved in wood formation. We conducted association mapping in a natural population of <i>P. tomentosa</i> (435 unrelated individuals) to evaluate genetic variation and the interaction of the lncRNA NERDL with <i>PtoNERD</i>. Using additive and dominant models, we identified 30 SNPs (<i>P</i> < 0.01) associated with five tree growth and wood property traits. Each SNP explained 3.90-8.57% of phenotypic variance, suggesting that NERDL and its putative target play a common role in wood formation. Epistasis analysis uncovered nine SNP-SNP association pairs between <i>NERDL</i> and <i>PtoNERD</i>, with an information gain of -7.55 to 2.16%, reflecting the strong interactions between NERDL and its putative target. This analysis provides a powerful method for deciphering the genetic interactions of lncRNAs with mRNA and dissecting the complex genetic network of quantitative traits in trees.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Shi</LastName><ForeName>Wan</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Quan</LastName><ForeName>Mingyang</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Du</LastName><ForeName>Qingzhang</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Deqiang</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry UniversityBeijing, China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>06</Month><Day>15</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Nerdl</Keyword><Keyword MajorTopicYN="N">association genetics</Keyword><Keyword MajorTopicYN="N">epistasis</Keyword><Keyword MajorTopicYN="N">lncRna–mRna interactions</Keyword><Keyword MajorTopicYN="N">wood formation</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>02</Month><Day>12</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>05</Month><Day>30</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>7</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>7</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>7</Month><Day>5</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28674544</ArticleId><ArticleId IdType="doi">10.3389/fpls.2017.01035</ArticleId><ArticleId IdType="pmc">PMC5475392</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Genetics. 1989 Nov;123(3):585-95</Citation><ArticleIdList><ArticleId IdType="pubmed">2513255</ArticleId></ArticleIdList></Reference><Reference><Citation>Theor Popul Biol. 1975 Apr;7(2):256-76</Citation><ArticleIdList><ArticleId IdType="pubmed">1145509</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2014 Jun;15(6):394-408</Citation><ArticleIdList><ArticleId IdType="pubmed">24805120</ArticleId></ArticleIdList></Reference><Reference><Citation>Gene. 2001 Mar 7;265(1-2):11-23</Citation><ArticleIdList><ArticleId IdType="pubmed">11255003</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 1993 Mar;133(3):693-709</Citation><ArticleIdList><ArticleId IdType="pubmed">8454210</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Cell. 2012 Oct 12;48(1):121-32</Citation><ArticleIdList><ArticleId IdType="pubmed">22940247</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11479-84</Citation><ArticleIdList><ArticleId IdType="pubmed">11562485</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 2000 Jun;155(2):945-59</Citation><ArticleIdList><ArticleId IdType="pubmed">10835412</ArticleId></ArticleIdList></Reference><Reference><Citation>Transl Psychiatry. 2012 Apr 17;2:e104</Citation><ArticleIdList><ArticleId IdType="pubmed">22832904</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2016 Mar;67(5):1477-92</Citation><ArticleIdList><ArticleId IdType="pubmed">26712827</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2009 Aug;10(8):565-77</Citation><ArticleIdList><ArticleId IdType="pubmed">19584810</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2011 Feb;12(2):111-22</Citation><ArticleIdList><ArticleId IdType="pubmed">21245829</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Genet Genomics. 2010 Aug;284(2):105-19</Citation><ArticleIdList><ArticleId IdType="pubmed">20577761</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2011 Oct;28(10):2731-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21546353</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2007 Oct 1;23(19):2633-5</Citation><ArticleIdList><ArticleId IdType="pubmed">17586829</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 2008 Sep;180(1):329-40</Citation><ArticleIdList><ArticleId IdType="pubmed">18716330</ArticleId></ArticleIdList></Reference><Reference><Citation>Genes Dev. 2002 Jan 1;16(1):6-21</Citation><ArticleIdList><ArticleId IdType="pubmed">11782440</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2003 Aug 5;100(16):9440-5</Citation><ArticleIdList><ArticleId IdType="pubmed">12883005</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2011 Jun 3;332(6034):1190-2</Citation><ArticleIdList><ArticleId IdType="pubmed">21636771</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 2005 Nov;171(3):1257-65</Citation><ArticleIdList><ArticleId IdType="pubmed">16085705</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Biol. 2014 Sep 17;15(9):458</Citation><ArticleIdList><ArticleId IdType="pubmed">25228471</ArticleId></ArticleIdList></Reference><Reference><Citation>J Theor Biol. 2006 Jul 21;241(2):252-61</Citation><ArticleIdList><ArticleId IdType="pubmed">16457852</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013 Apr 16;8(4):e60880</Citation><ArticleIdList><ArticleId IdType="pubmed">23613749</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2014 Jan;15(1):22-33</Citation><ArticleIdList><ArticleId IdType="pubmed">24296533</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 2007 Apr;175(4):1955-63</Citation><ArticleIdList><ArticleId IdType="pubmed">17277367</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2003 Dec 12;19(18):2496-7</Citation><ArticleIdList><ArticleId IdType="pubmed">14668244</ArticleId></ArticleIdList></Reference><Reference><Citation>Dev Cell. 2014 Jul 28;30(2):166-76</Citation><ArticleIdList><ArticleId IdType="pubmed">25073154</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2009 Jul;21(7):1877-96</Citation><ArticleIdList><ArticleId IdType="pubmed">19574434</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2006 Sep 15;313(5793):1596-604</Citation><ArticleIdList><ArticleId IdType="pubmed">16973872</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2013 Feb;197(3):763-76</Citation><ArticleIdList><ArticleId IdType="pubmed">23278184</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2011 Jun 05;43(7):621-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21642992</ArticleId></ArticleIdList></Reference><Reference><Citation>RNA. 2010 Aug;16(8):1478-87</Citation><ArticleIdList><ArticleId IdType="pubmed">20587619</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Plant Biol. 2015;66:243-67</Citation><ArticleIdList><ArticleId IdType="pubmed">25494460</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2006 Feb;38(2):203-8</Citation><ArticleIdList><ArticleId IdType="pubmed">16380716</ArticleId></ArticleIdList></Reference><Reference><Citation>Theor Appl Genet. 1968 Jun;38(6):226-31</Citation><ArticleIdList><ArticleId IdType="pubmed">24442307</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2012 Mar;22(3):577-91</Citation><ArticleIdList><ArticleId IdType="pubmed">22110045</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Protoc. 2012 Mar 01;7(3):562-78</Citation><ArticleIdList><ArticleId IdType="pubmed">22383036</ArticleId></ArticleIdList></Reference><Reference><Citation>Int J Mol Sci. 2015 Mar 10;16(3):5467-96</Citation><ArticleIdList><ArticleId IdType="pubmed">25764159</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2014 Feb;164(2):548-54</Citation><ArticleIdList><ArticleId IdType="pubmed">24309192</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2015 Jul;242(1):77-95</Citation><ArticleIdList><ArticleId IdType="pubmed">25833262</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2014 Sep;65(17):4975-83</Citation><ArticleIdList><ArticleId IdType="pubmed">24948679</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2009 Jan 23;136(2):215-33</Citation><ArticleIdList><ArticleId IdType="pubmed">19167326</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2003 Feb 12;19(3):376-82</Citation><ArticleIdList><ArticleId IdType="pubmed">12584123</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2016 Aug 03;7:1159</Citation><ArticleIdList><ArticleId IdType="pubmed">27536313</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2009 Feb 20;136(4):629-41</Citation><ArticleIdList><ArticleId IdType="pubmed">19239885</ArticleId></ArticleIdList></Reference><Reference><Citation>J Hered. 2012 Nov-Dec;103(6):853-62</Citation><ArticleIdList><ArticleId IdType="pubmed">23008443</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2011 Jan 7;331(6013):76-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21127216</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2015 Jan;241(1):125-43</Citation><ArticleIdList><ArticleId IdType="pubmed">25230698</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Biol. 2014 Dec 03;15(12):512</Citation><ArticleIdList><ArticleId IdType="pubmed">25517485</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Shi, Wan" sort="Shi, Wan" uniqKey="Shi W" first="Wan" last="Shi">Wan Shi</name></noRegion><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><name sortKey="Du, Qingzhang" sort="Du, Qingzhang" uniqKey="Du Q" first="Qingzhang" last="Du">Qingzhang Du</name><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name><name sortKey="Quan, Mingyang" sort="Quan, Mingyang" uniqKey="Quan M" first="Mingyang" last="Quan">Mingyang Quan</name><name sortKey="Shi, Wan" sort="Shi, Wan" uniqKey="Shi W" first="Wan" last="Shi">Wan Shi</name><name sortKey="Shi, Wan" sort="Shi, Wan" uniqKey="Shi W" first="Wan" last="Shi">Wan Shi</name><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name><name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001168 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001168 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PoplarV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:28674544
|texte= The Interactions between the Long Non-coding RNA NERDL and Its Target Gene Affect Wood Formation in Populus tomentosa.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:28674544" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarV1
| This area was generated with Dilib version V0.6.37. |  |